cellcoloc.export_analysis_outputs

cellcoloc.export_analysis_outputs(run_result, paths, optional_region_result=None)[source]

Write all standard tables and masks for one completed analysis run.

Parameters:
  • run_result – Completed Cellpose colocalization result bundle.

  • paths – Standardized output paths created for the current dataset.

  • optional_region_result – Optional third-channel segmentation result. When provided, the labeled mask is exported alongside the main colocalization outputs.

Return type:

None